Flow Cytometry Workshop at BioC 2011

There will be an afternoon practical workshop on the analysis of flow cytometry data using Bioconductor tools at this year’s BioC held in Seattle on July 27th through 29th.

Bioconductor has a rich set of tools for analysing flow cytometry data. However, many of these tools have a steep learning curve. This workshop will walk through a complete analysis of a flow cytometry data

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data, through compensation, transformation, gating, and finally summarization of results. The workshop will present two parallel workflows

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for analysing the same FCM data set: one will be an advanced analysis where all processing steps are done using Bioconductor packages. The second will use a new Bioconductor package, flowWorkspace, that allows importing of fully gated, compensated, and transformed data from flowJo workspace files into R. The goal of the workshop is to provide advanced and novice Bioconductor users who are interested in FCM data analysis a point of reference where they can begin comfortably working with their own data sets.


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information about BioC 2011.

Hope to see you there.

About Greg Finak

I obtained my PhD in Biochemistry and Bioinformatics from McGill University. I am developing methods for analyzing high throughput, high content flow cytometry data.


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